Comparative analyses of six solanaceous transcriptomes reveal a high degree of sequence conservation and species-specific transcripts

doi:10.1186/1471-2164-6-124

BMC Genomics

Volume 6

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Lee Y
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Iobst S
Ouyang S
Buell CR

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Research article

Comparative analyses of six solanaceous transcriptomes reveal a high degree of sequence conservation and species-specific transcripts

Willem Albert Rensink , Yuandan Lee , Jia Liu , Stacy Iobst , Shu Ouyang and C Robin Buell

The Institute for Genomic Research, 9712 Medical Center Dr., Rockville MD, 20850, USA

author email corresponding author email

BMC Genomics 2005, 6:124doi:10.1186/1471-2164-6-124


Published:	14 September 2005

Additional files

Additional File 1:

Supplemental Table 1 (split into two files) containing the Solanaceae ortholog clusters, for each cluster the TC numbers from each gene index are listed that form an ortholog cluster.

Format: TXT Size: 7.5MB Format: TXT Size: 5.6MB Download file

Additional File 3:

Supplemental Table 2 containing the Solanaceae specific transcripts, for each of the six solanaceous species the TC numbers are listed without matches in 23 other plant species (see Table 4), transcripts unique to Solanaceae (Table 5, right panel, TBLASTX E-05) and transcripts unique to each species (Table 5, left panel, TBLASTX E-05).

Format: TXT Size: 1.4MB Download file