Table 7

Ambystoma limb regeneration contigs that show sequence similarity to zebrafish fin regeneration ESTs

Mex. Contigs

Human ID

E-value

Zfish ID

E-value


Contig94

gi|10835079|

1e-63

gnl|UG|Dr#S12319632

1e-58

nm_30_a11_t3_

gi|32306539|

1e-58

gnl|UG|Dr#S12312602

1e-35

Contig615

gi|4502693|

1e-70

gnl|UG|Dr#S12313407

1e-34

nm_23_l13_t3_

No Human Hit

gnl|UG|Dr#S12320916

1e-31

nm_9_e22_t3_

gi|4758788|

1e-98

gnl|UG|Dr#S12309914

1e-29

nm_8_l17_t3_

gi|21361310|

1e-16

gnl|UG|Dr#S12313396

1e-27

Contig531

gi|13775198|

1e-27

gnl|UG|Dr#S12309680

1e-26

Contig152

gi|5453712|

1e-32

gnl|UG|Dr#S12239884

1e-26

nm_32h_j20_t3_

gi|39777601|

1e-79

gnl|UG|Dr#S12136499

1e-25

Contig1011

gi|39752675|

1e-65

gnl|UG|Dr#S12136499

1e-24

v11_p50_b24_t3_

gi|41208832|

1e-36

gnl|UG|Dr#S12319219

1e-23

Contig589

gi|4506505|

1e-56

gnl|UG|Dr#S12312662

1e-22

Contig785

gi|33695095|

1e-61

gnl|UG|Dr#S12264765

1e-22

Contig157

gi|21361122|

1e-138

gnl|UG|Dr#S12313094

1e-21

v11_p42_j20_t3_049_ab1

gi|47591841|

1e-100

gnl|UG|Dr#S12137806

1e-21

Contig610

gi|10801345|

1e-114

gnl|UG|Dr#S12310326

1e-20

nm_27_o1_t3_

gi|7706429|

1e-72

gnl|UG|Dr#S12310422

1e-19

Contig439

gi|4504799|

1e-25

gnl|UG|Dr#S12309233

1e-19

nm_31_d5_t3_

gi|8923956|

1e-50

gnl|UG|Dr#S12264745

1e-17

v11_p41_h12_t3_026_ab1

No Human Hit

gnl|UG|Dr#S12320916

1e-17

Contig129

gi|34932414|

1e-103

gnl|UG|Dr#S12313534

1e-17

nm_14_j21_t3_

gi|4505325|

1e-42

gnl|UG|Dr#S12136571

1e-17

Contig1321

gi|4501857|

1e-80

gnl|UG|Dr#S12309233

1e-17

nm_19_k3_t3_

gi|26051212|

1e-106

gnl|UG|Dr#S12137637

1e-17

Contig488

gi|4557525|

1e-105

gnl|UG|Dr#S12311975

1e-15

nm_35h_k19_t3_

gi|16950607|

1e-43

gnl|UG|Dr#S12196214

1e-15

Contig195

gi|4557231|

1e-99

gnl|UG|Dr#S12309233

1e-14

nm_14_h19_t3_

gi|4503787|

1e-86

gnl|UG|Dr#S12310912

1e-13

v11_p51_d20_t3_

gi|30520322|

1e-19

gnl|UG|Dr#S12321150

1e-13

g3-n14

gi|13654278|

1e-23

gnl|UG|Dr#S12318856

1e-13

nm_29_f2_t3_

gi|4506517|

1e-65

gnl|UG|Dr#S12312662

1e-13

g4-h23

gi|24111250|

1e-33

gnl|UG|Dr#S12312651

1e-13

Math_p2_A2_T3_

No human Hit

gnl|UG|Dr#S12078998

1e-13

nm_35h_f4_t3_

gi|41148476|

1e-67

gnl|UG|Dr#S12319663

1e-13

Contig952

gi|21264558|

1e-61

gnl|UG|Dr#S12318843

1e-12

g4-g21

gi|11995474|

1e-65

gnl|UG|Dr#S12192716

1e-12

Contig854

gi|8922789|

1e-117

gnl|UG|Dr#S12313534

1e-11

Contig1105

gi|6912638||

1e-83

gnl|UG|Dr#S12079967

1e-11

nm_26_f7_t3_

gi|30181238|

1e-83

gnl|UG|Dr#S12319880

1e-11

Contig949

gi|21284385|

1e-68

gnl|UG|Dr#S12290856

1e-11

g3-n3

gi|18490991|

1e-64

gnl|UG|Dr#S12320832

1e-10

v11_p41_m16_t3_007_ab1

gi|4885661|

1e-33

gnl|UG|Dr#S12310912

1e-10

Contig653

gi|4505047|

1e-124

gnl|UG|Dr#S12239868

1e-09

Contig1349

gi|9665259|

1e-46

gnl|UG|Dr#S12320840

1e-09

6h12

gi|31317231|

1e-43

gnl|UG|Dr#S12321311

1e-09

v11_p43h_i14_t3_070_ab1

No Human Hit

gnl|UG|Dr#S12320916

1e-09

nm_35h_d11_t3_

gi|7661790|

1e-35

gnl|UG|Dr#S12196146

1e-09

nm_35h_k22_t3_

gi|5031977|

1e-124

gnl|UG|Dr#S12242267

1e-09

v11_p48_g2_t3_087_ab1

gi|11496277|

1e-60

gnl|UG|Dr#S12312396

1e-09

nm_30_e11_t3_

gi|32483357|

1e-56

gnl|UG|Dr#S12309103

1e-08

nm_28_f23_t3_

gi|42544191|

1e-25

gnl|UG|Dr#S12239884

1e-08

nm_12_p16_t3_

gi|21361553|

1e-21

gnl|UG|Dr#S12310912

1e-08

nm_32h_a8_t3_

gi|11386179|

1e-22

gnl|UG|Dr#S12312152

1e-08


Human RefSeq sequence ID's are provided to allow cross-referencing.

Putta et al. BMC Genomics 2004 5:54   doi:10.1186/1471-2164-5-54

Open Data