Table 7

Ambystoma limb regeneration contigs that show sequence similarity to zebrafish fin regeneration ESTs

Mex. Contigs
Human ID
E-value
Zfish ID
E-value

Contig94
gi|10835079|
1e-63
gnl|UG|Dr#S12319632
1e-58
nm_30_a11_t3_
gi|32306539|
1e-58
gnl|UG|Dr#S12312602
1e-35
Contig615
gi|4502693|
1e-70
gnl|UG|Dr#S12313407
1e-34
nm_23_l13_t3_
No Human Hit

gnl|UG|Dr#S12320916
1e-31
nm_9_e22_t3_
gi|4758788|
1e-98
gnl|UG|Dr#S12309914
1e-29
nm_8_l17_t3_
gi|21361310|
1e-16
gnl|UG|Dr#S12313396
1e-27
Contig531
gi|13775198|
1e-27
gnl|UG|Dr#S12309680
1e-26
Contig152
gi|5453712|
1e-32
gnl|UG|Dr#S12239884
1e-26
nm_32h_j20_t3_
gi|39777601|
1e-79
gnl|UG|Dr#S12136499
1e-25
Contig1011
gi|39752675|
1e-65
gnl|UG|Dr#S12136499
1e-24
v11_p50_b24_t3_
gi|41208832|
1e-36
gnl|UG|Dr#S12319219
1e-23
Contig589
gi|4506505|
1e-56
gnl|UG|Dr#S12312662
1e-22
Contig785
gi|33695095|
1e-61
gnl|UG|Dr#S12264765
1e-22
Contig157
gi|21361122|
1e-138
gnl|UG|Dr#S12313094
1e-21
v11_p42_j20_t3_049_ab1
gi|47591841|
1e-100
gnl|UG|Dr#S12137806
1e-21
Contig610
gi|10801345|
1e-114
gnl|UG|Dr#S12310326
1e-20
nm_27_o1_t3_
gi|7706429|
1e-72
gnl|UG|Dr#S12310422
1e-19
Contig439
gi|4504799|
1e-25
gnl|UG|Dr#S12309233
1e-19
nm_31_d5_t3_
gi|8923956|
1e-50
gnl|UG|Dr#S12264745
1e-17
v11_p41_h12_t3_026_ab1
No Human Hit

gnl|UG|Dr#S12320916
1e-17
Contig129
gi|34932414|
1e-103
gnl|UG|Dr#S12313534
1e-17
nm_14_j21_t3_
gi|4505325|
1e-42
gnl|UG|Dr#S12136571
1e-17
Contig1321
gi|4501857|
1e-80
gnl|UG|Dr#S12309233
1e-17
nm_19_k3_t3_
gi|26051212|
1e-106
gnl|UG|Dr#S12137637
1e-17
Contig488
gi|4557525|
1e-105
gnl|UG|Dr#S12311975
1e-15
nm_35h_k19_t3_
gi|16950607|
1e-43
gnl|UG|Dr#S12196214
1e-15
Contig195
gi|4557231|
1e-99
gnl|UG|Dr#S12309233
1e-14
nm_14_h19_t3_
gi|4503787|
1e-86
gnl|UG|Dr#S12310912
1e-13
v11_p51_d20_t3_
gi|30520322|
1e-19
gnl|UG|Dr#S12321150
1e-13
g3-n14
gi|13654278|
1e-23
gnl|UG|Dr#S12318856
1e-13
nm_29_f2_t3_
gi|4506517|
1e-65
gnl|UG|Dr#S12312662
1e-13
g4-h23
gi|24111250|
1e-33
gnl|UG|Dr#S12312651
1e-13
Math_p2_A2_T3_
No human Hit

gnl|UG|Dr#S12078998
1e-13
nm_35h_f4_t3_
gi|41148476|
1e-67
gnl|UG|Dr#S12319663
1e-13
Contig952
gi|21264558|
1e-61
gnl|UG|Dr#S12318843
1e-12
g4-g21
gi|11995474|
1e-65
gnl|UG|Dr#S12192716
1e-12
Contig854
gi|8922789|
1e-117
gnl|UG|Dr#S12313534
1e-11
Contig1105
gi|6912638||
1e-83
gnl|UG|Dr#S12079967
1e-11
nm_26_f7_t3_
gi|30181238|
1e-83
gnl|UG|Dr#S12319880
1e-11
Contig949
gi|21284385|
1e-68
gnl|UG|Dr#S12290856
1e-11
g3-n3
gi|18490991|
1e-64
gnl|UG|Dr#S12320832
1e-10
v11_p41_m16_t3_007_ab1
gi|4885661|
1e-33
gnl|UG|Dr#S12310912
1e-10
Contig653
gi|4505047|
1e-124
gnl|UG|Dr#S12239868
1e-09
Contig1349
gi|9665259|
1e-46
gnl|UG|Dr#S12320840
1e-09
6h12
gi|31317231|
1e-43
gnl|UG|Dr#S12321311
1e-09
v11_p43h_i14_t3_070_ab1
No Human Hit

gnl|UG|Dr#S12320916
1e-09
nm_35h_d11_t3_
gi|7661790|
1e-35
gnl|UG|Dr#S12196146
1e-09
nm_35h_k22_t3_
gi|5031977|
1e-124
gnl|UG|Dr#S12242267
1e-09
v11_p48_g2_t3_087_ab1
gi|11496277|
1e-60
gnl|UG|Dr#S12312396
1e-09
nm_30_e11_t3_
gi|32483357|
1e-56
gnl|UG|Dr#S12309103
1e-08
nm_28_f23_t3_
gi|42544191|
1e-25
gnl|UG|Dr#S12239884
1e-08
nm_12_p16_t3_
gi|21361553|
1e-21
gnl|UG|Dr#S12310912
1e-08
nm_32h_a8_t3_
gi|11386179|
1e-22
gnl|UG|Dr#S12312152
1e-08

Human RefSeq sequence ID's are provided to allow cross-referencing.

Putta et al. BMC Genomics 2004 5:54   doi:10.1186/1471-2164-5-54