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Genomotyping results of N. gonorrhoeae strain FA1090 versus N. gonorrhoeae strain MS11. |
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| Gene probes hybridizing to FA1090 but not MS11 |
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| Genes known to be associated with divergence: |
Lack of hybridization may be due to: |
| XNG0049 (pilC1) |
divergence in MS11 pilC sequence (Z50180) |
| XNG0210 (hypothetical) |
maf-associated divergence |
| XNG0211 (hypothetical) |
maf-associated divergence |
| XNG0212 (hypothetical) |
maf-associated divergence |
| XNG0213 (hypothetical) |
maf-associated divergence |
| XNG1280 (hypothetical) |
maf-associated divergence |
| XNG0442 (hypothetical) |
prophage region-associated divergence |
| XNG1509 (hypothetical) |
prophage region-associated divergence |
| Genes associated with strain-specific regions: |
Associated strain-specific region: |
| XNG0080 (hypothetical) |
hypo-pglB MME |
| XNG0081 (hypothetical) |
hypo-pglB MME |
| XNG0528 (hypothetical) |
hypo-aspA MME |
| XNG0529 (hypothetical) |
hypo-aspA MME |
| XNG0669 (hypothetical) |
ribAB-hypo MME |
| XNG0670 (type I restriction enzyme M protein) |
ribAB-hypo MME |
| XNG0671 (ribA-B) |
ribAB-hypo MME |
| XNG0741 (hypothetical) |
ung-hypo MME |
| XNG1618 (hypothetical) |
nuoL-nuoM MME |
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| Gene probes hybridizing to MS11 but not FA1090 |
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| Genes known to be associated with divergence |
Hybridization to non-FA1090 probes may be due to: |
| NMA1797 (tspB) |
divergence in MS11 tspB sequence |
| NMB1119 (hypothetical) |
prophage region-associated divergence |
| NMB1120 (hypothetical) |
prophage region-associated divergence |
| GCJDS60 (suppressor) |
prophage region-associated divergence |
| GCJDS61 (regulator) |
prophage region-associated divergence |
| Genes associated with strain-specific regions: |
Associated strain-specific region: |
| 59 Gonococcal Genetic Island genes |
ung-hypo MME |
Snyder et al. BMC Genomics 2004 5:23 doi:10.1186/1471-2164-5-23 |
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