Table 1

Roche-454 read statistics for DENV-1 at multiple titrations
Dengue-1 pfu/mL Estimated max. genome copies/mL Reads mapped per 100,000 Fraction of reference covered Average Ct Contig(s) by de novo assembly? Fraction of reference covered
1X102 1X104 – 1.7X104 0 0 NA N 0
1X102.3 2X104 – 3.4X104 0 0 27.65 N 0
1X102.5 3.2X104 – 5.4X104 0.34 0.05 ND N 0
1X102.5 3.2X104 – 5.4X104 1.82 0.31 27.03 Y 0.04
1X103 1X105 – 1.7X105 3.4 0.4 25.66 Y 0.20
1X103 1X105 – 1.7X105 4.7 0.72 ND ND ND
1X104 1X106 – 1.7X106 34.2 0.92 21.79 Y 0.76
1X105 1X107 – 1.7X107 190.9 0.99 18.05 Y 0.99
1X106 1X108 – 1.7X108 227.1 0.99 14.56 Y 0.99

Frey et al.

Frey et al. BMC Genomics 2014 15:96   doi:10.1186/1471-2164-15-96

Open Data