Figure 6.

Three S. sclerotiorum-specific effector candidates identified by pattern and fold recognition. (a) Superimposed 3D protein structure of SS1G_09512 model (rainbow) and the lectin domain of Streptococcus mitis lectinolysin (tan). RMSD calculated by TM-align was 3.50 Å. (b) Superimposed 3D protein structure of SS1G_12769 model (rainbow) and Necator americanus Saposin-like protein Na-SLP-1 (tan). RMSD calculated by TM-align was 2.43 Å. (c) Superimposed 3D protein structure of SS1G_13235 model (rainbow) and the C-terminal domain of Homo sapiens Death Associated Protein 5 (tan). RMSD calculated by TM-align was 2.98 Å. RMSD, root mean square deviation.

Guyon et al. BMC Genomics 2014 15:336   doi:10.1186/1471-2164-15-336
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