Table 1

Main features of the Ion Torrent Personal Genome Machine datasets used in this study
Ion Torrent PGM data
Name Chip Number of reads Mean length Organism
RD_100 316 1,713,033 111 bp E. coli K-12 DH10B
RD_200 316 2,176,492 226 bp E. coli K-12 DH10B
RD_400 318 6,668,556 312 bp E. coli K-12 MG1655

The datasets all contain only single-reads with different mean sizes.

Caboche et al.

Caboche et al. BMC Genomics 2014 15:264   doi:10.1186/1471-2164-15-264

Open Data