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An evaluation of genotyping by sequencing (GBS) to map the Breviaristatum-e (ari-e) locus in cultivated barley

Hui Liu14, Micha Bayer1, Arnis Druka1, Joanne R Russell1, Christine A Hackett2, Jesse Poland3, Luke Ramsay1, Pete E Hedley1 and Robbie Waugh15*

Author Affiliations

1 Cell and Molecular Sciences, The James Hutton Institute, Invergowrie, Dundee, Scotland DD2 5DA, UK

2 Biomathematics and Statistics Scotland (BioSS), Invergowrie, Dundee, Scotland DD2 5DA, UK

3 Hard Winter Wheat Genetics Research Unit, USDA-ARS and Department of Agronomy, Kansas State University, 4011 Throckmorton, Manhattan, KS 66506, USA

4 Biomedical Sciences Research Complex, University of St Andrews, North Haugh, St Andrews, Scotland KY16 9ST, UK

5 Division of Plant Sciences, James Hutton Institute, Invergowrie, The University of Dundee. College of Life Sciences, Dundee, Scotland DD2 5DA, UK

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BMC Genomics 2014, 15:104  doi:10.1186/1471-2164-15-104

Published: 6 February 2014

Additional files

Additional file 1: Table S1:

Barcode adapters used for GBS.

Format: XLSX Size: 19KB Download file

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Additional file 2: Table S2:

GBS read distribution.

Format: XLSX Size: 11KB Download file

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Additional file 3: Figure S1:

Data processing workflow for the raw GBS Illumina reads.

Format: PDF Size: 57KB Download file

This file can be viewed with: Adobe Acrobat Reader

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Additional file 4: Table S3:

Co-dominant GBS markers.

Format: XLSX Size: 96KB Download file

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