Open Access Methodology article

Identification of two putative reference genes from grapevine suitable for gene expression analysis in berry and related tissues derived from RNA-Seq data

Mauricio González-Agüero1, Miguel García-Rojas1, Alex Di Genova2, José Correa1, Alejandro Maass3, Ariel Orellana4 and Patricio Hinrichsen1*

Author Affiliations

1 Instituto de Investigaciones Agropecuarias (INIA -Chile), La Platina Research Centre, Santiago, Chile. Av. Santa Rosa 11, 610, P.O. Box 439-3, Santiago, Chile

2 Laboratory of Bioinformatics and Mathematics of the Genome, Center for Mathematical Modeling (UMI2807-CNRS) and FONDAP Center for Genome Regulation, Faculty of Mathematical and Physical Sciences, Avda. Blanco Encalada 2120, 6th Floor, University of Chile, Santiago, Chile

3 Department of Mathematical Engineering, Center for Mathematical Modeling (UMI2807-CNRS) and FONDAP Center for Genome Regulation, Faculty of Mathematical and Physical Sciences, Avda. Blanco Encalada 2120, 7th Floor, University of Chile, Santiago, Chile

4 Centro de Biotecnología Vegetal, Universidad Andrés Bello. Av. República 217, Santiago, Chile

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BMC Genomics 2013, 14:878  doi:10.1186/1471-2164-14-878

Published: 13 December 2013

Additional files

Additional file 1: Table S1:

List of the 242 candidate reference genes ranked according to their CV values.

Format: XLS Size: 67KB Download file

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Additional file 2: Table S2:

Determination of threshold values (Ct) obtained from qPCR analyses.

Format: XLS Size: 28KB Download file

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Additional file 3: Table S3:

List of the samples and conditions used for the RNA-Seq experiments.

Format: XLS Size: 28KB Download file

This file can be viewed with: Microsoft Excel Viewer

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