Table 2

Inventory of regulatory proteins detected in Buchnera
Gene name Regulator type Identitya BAp BSg BBp BCc BCtb Protc
rpoD σ factors 82.11 + + + + + + (236)
rpoH 72.18 + + + + +
alaS “Specific” 50.11 + + + + + + (137)
bolA 27.62 + + + + +
pepA 52.09 + + + + + (301)
metR pseudo +
dksA Bifunctional 70.89 + + + + + (218)
cspC 91.30 + + (229)
cspE 94.20 + + + + + + (243)
csrA 86.89 + + + + +
ychA Hypothetical 57.62 + + + + + + (215)
yrbA 41.67 + + + + + + (348)
fis NAPs and topoisomerases 65.31 + + + + (366)
hns 60.58 +
hupA 66.30 + + + + (307)
himA 59.80 + + + + + (321)
himD 68.08 + + + + + (397)
ybaB 81.65 + + + + + + (283)
topA 55.43 + +
gyrA 63.58 + + + + + + (102)
gyrB 62.11 + + + + + + (124)

a: protein sequence identity (%) with the E. coli orthologous gene; b: genome sequence of BCt was not analysed systematically, we have only reported here the presence/absence of orthologous genes; c: proteomic data were compiled from [66], +/− (rank) indicates the presence/absence of the protein in partially purified samples of BAp (rank of the quantitative detection out of 400 proteins).

Brinza et al.

Brinza et al. BMC Genomics 2013 14:73   doi:10.1186/1471-2164-14-73

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