Table 1

Overview on 73 TcABC genes identified in the T. castaneum genome
Gene REFSEQ GLEAN Position (Strand) Mw [kDa] ESTs PCR verified
A
TcABCA-UA XP_967122.2 10722 N/A 114.4 0 N/D
TcABCA-UB XP_970623.2 02280 N/A 185.2 3 +
TcABCA-UC XP_001809119.1 02278 N/A 164.2 0 +
TcABCA-UD XP_970754.2 N/A N/A 197.7 2 N/D
TcABCA-UE XP_970882.2 02274 N/A 214.7 8 +
TcABCA-3A XP_967691.2 10527 17,798,192.17,808,653 (+) 148.0 0 +
TcABCA-6A XP_001812136.1 15859 12,187,194.12,207,176 (+) 184.6 2 +
TcABCA-7A XP_969271.1 N/A 650,182.660,292 (+) 186.3 11 +
TcABCA-9A N/A 16282 13,853,789.13,858,783 (−) 136.7 0 +
TcABCA-9B N/A 16281 13,861,970.13,866,823 (−) 104.4 1 +
B
TcABCB-3A XP_967244.2 03402 5,939,075.5,943,546 (+) 131.0 2 +
TcABCB-3B XP_001810982.1 03797 22,077,333.22,099,171 (+) 139.9 3 +
TcABCB-4A XP_966724.1 08383 10,890,934.10,895,745 (+) 70.9 3 +
TcABCB-5A XP_001813375.1 14809 19,030,456.19,033,317 (+) 78.5 2 +
TcABCB-6A XP_974441.2 15192 2,726,918.2,738,164 (−) 95.1 4 +
TcABCB-7A XP_972133.1 09730 6,893,504.6,896,933 (+) 76.3 2 +
C
TcABCC-UA XP_971058.2 08570 N/A 118.4 0 +
TcABCC-UB XP_970354.2 01803 N/A 162.6 0 +
TcABCC-4A XP_972214.2 08035 4,956,628.4,983,422 (+) 185.8 2 +
TcABCC-5A XP_973658.1 13752 5,966,306.5,973,951 (−) 127.2 3 +
TcABCC-5B XP_973693.1 13751 5,978,733.5,988,109 (−) 143.9 0 +
TcABCC-5C XP_973725.2 13750 5,989,614.5,994,073 (−) 142.5 3 +
TcABCC-5D XP_973757.2 13749 5,995,524.5,999,966 (−) 142.9 3 +
TcABCC-5E XP_968524.2 14089 6,969,497.6,973,765 (+) 144.3 0 +
TcABCC-5F XP_968603.2 14090 6,975,148.6,979,220 (+) 125.7 4 +
TcABCC-5G N/A 14091 6,981,397.6,985,546 (+) 108.0 0 +
TcABCC-5H XP_968748.1 14092 6,989,375.6,993,654 (+) 147.3 6 +
TcABCC-5I N/A 10434 8,860,574.8,868,920 (−) 147.4 10 +
TcABCC-5J XP_971732.1 14379 12,075,643.12,079,703 (+) 141.1 0 +
TcABCC-5K XP_971687.2 14380 12,080,534.12,084,545 (+) 136.1 0 +
TcABCC-5L N/A 14381 12,085,585.12,089,465 (+) 132.8 0 +
TcABCC-5M N/A 14382 12,090,049.12,093,099 (+) 103.2 0 +
TcABCC-5N XP_971802.2 14383 12,094,316.12,098,575 (+) 143.1 3 +
TcABCC-5O XP_971857.2 14384 12,099,129.12,103,236 (+) 140.7 0 +
TcABCC-5P XP_971908.1 14385 12,103,832.12,107,957 (+) 143.6 0 +
TcABCC-5Q XP_971965.2 14386 12,109,821.12,114,012 (+) 143.3 5 +
TcABCC-5R N/A 14403 12,560,442.12,565,573 (+) 150.6 6 +
TcABCC-5S XP_970316.2 14589 15,369,140.15,373,635 (+) 149.6 0 +
TcABCC-5T XP_969781.1 14775 18,589,675.18,598,980 (+) 146.7 5 +
TcABCC-5U XP_969849.1 N/A 18,599,335.18,606,763 (+) 145.4 2 +
TcABCC-5V XP_001810350.1 N/A 18,607,427.18,612,030 (+) 147.2 0 +
TcABCC-6A XP_969711.1 15346 188,365.195,414 (−) 140.4 3 +
TcABCC-6B N/A (former 15131) 4,354,979.4,364,295 (−) 139.0 0 +
TcABCC-6C XP_970526.1 14880 11,705,126.11,709,007 (−) 136.4 0 +
TcABCC-7A XP_972486.2 09891 13,193,223.13,202,867 (+) 147.9 0 +
TcABCC-7B XP_972534.1 09892 13,205,046.13,210,240 (+) 146.6 2 +
TcABCC-8A XP_969997.2 06467 12,119,015.12,122,960 (+) 130.5 0 +
TcABCC-8B XP_970068.2 06468 12,123,192.12,127,192 (+) 132.4 0 +
TcABCC-9A XP_969354.2 12253 837,310.846,332 (+) 202.6 5 +
TcABCC-9B XP_969737.2 10962 5,070,045.5,076,707 (−) 94.5 0 +
TcABCC-9C XP_001813826.1 11800 18,102,317.18,105,944 (−) 68.1 0 +
D
TcABCD-6A XP_971218.1 15333 332,622.337,550 (−) 82.3 4 +
TcABCD-9A XP_971649.2 12277 2,166,813.2,174,693 (+) N/A 1 +
E
TcABCE-3A XP_968009.1 10519 17,851,529.17,857,456 (−) 68.6 21 +
F
TcABCF-2A XP_971562.1 04420 6,966,233.6,971,293 (−) 91.1 2 +
TcABCF-5A XP_966990.1 13884 2,974,669.2,984,045 (−) 70.4 4 +
TcABCF-9A XP_972814.1 11927 15,974,910.15,978,068 (−) 79.4 3 +
G
TcABCG-4A XP_971210.2 07470 4,859,967.4,868,694 (−) 71.3 18 +
TcABCG-4B XP_971681.1 07467 4,894,214.4,898,836 (−) 70.9 6 +
TcABCG-4C XP_001813184.1 07466 4,901,619.4,910,932 (−) 75.5 26 +
TcABCG-4D XP_973458.1 08293 9,112,640.9,117,930 (+) 79.2 4 +
TcABCG-4E XP_001811847.1 N/A 11,388,853.11,411,657 (+) 71.9 2 +
TcABCG-4F XP_971735.1 07074 11,389,147.11,395,881 (−) 67.8 13 +
TcABCG-4G XP_973493.1 08454 12,061,217.12,066,316 (+) 70.6 4 +
TcABCG-4H XP_973526.1 07047 12,069,092.12,077,377 (−) 74.1 6 +
TcABCG-8A XP_975214.2 05701 10,510,228.10,520,727 (−) 74.3 0 +
TcABCG-9A XP_968696.1 11998 12,953,115.12,965,075 (−) 72.2 3 +
TcABCG-9B NP_001034521.1 11997 12,969,020.12,977,333 (−) 74.4 0 +
TcABCG-9C XP_968472.1 11713 19,576,197.19,580,771 (−) 102.8 1 +
TcABCG-9D XP_968555.1 12778 19,586,463.19,590,663 (+) 81.5 0 +
H
TcABCH-9A XP_973444.1 12169 2,432,030.2,439,299 (−) 79.6 2 +
TcABCH-9B XP_967359.1 12512 15,160,638.15,174,277 (+) 84.1 2 +
TcABCH-9C XP_974932.1 11755 18,625,705.18,648,891 (−) 87.7 6 +

Broehan et al.

Broehan et al. BMC Genomics 2013 14:6   doi:10.1186/1471-2164-14-6

Open Data