Additional file 4.

Genes differentially regulated between the 5 breeds in BMDM and MDM.‚ÄČAs in Figure 6, list of genes DR in BMDM and MDM after 7 h of LPS stimulation were grouped and included into a heat-maps (A and B respectively). DU is in red, HAM in blue, LR in green, LW in purple and PIE in yellow. The blue colour in the heat-map represents down-regulation of the gene and the red up-regulation of the gene in function to the average expression of the probeset. Duplicated probesets were removed, a total of 38 different genes for BMDM and 65 for MDM were plotted (p <0.01 and fold change >3 or <-3).

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Kapetanovic et al. BMC Genomics 2013 14:581   doi:10.1186/1471-2164-14-581