Additional file 16: Figure S2.

Maximum likelihood tree of three loci (COI, Cytb, 28S). Data matrix was generated from 15 Favia species and Fav1 and Fav2. Nucleotide sequences were aligned using clustalw2 with default parameters, the 3 loci matrix was generated using FASconCAT, and the tree was constructed using RaxML (See methods). Montastrea cavernosa is selected as the out-group.

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Pooyaei Mehr et al. BMC Genomics 2013 14:546   doi:10.1186/1471-2164-14-546