Table 1

The full repertoire of secretion systems of P. fluorescens F113
Secretion system Phylogenetic cluster Locus Putative substrate
T1SS PSF113_0209-0211 PSF113_0208
opmH (PSF113_0530)*
PSF113_1508-1510 PSF113_1511
PSF113_2734-2736 PSF113_2737
aprDEF (PSF113_2945-2947) aprA (PSF113_2949), aprI (PSF113_2948), lipA (PSF113_2944)
PSF113_3005-3007 psmE (PSF113_3004)
PSF113_3055-3056*
PSF113_3303-3305
T2SS Xcp xcpP-Z (PSF113_0437-0447), xcpA (PSF113_5006) PSF113_0435, PSF113_0610, PSF113_2337, PSF113_3279
Hxc hxcP-Z (PSF113_3690-3700) psp (PSF113_3701)
T3SS SPI-I invF-orgB (PSF113_1778-1801) PSF113_1802
Hrp1 rspS-rspL (PSF113_5585-5610) ropAA-1 (PSF113_1126), ropAA-2 (PSF113_3486), ropB (PSF113_5598), ropM (PSF113_5616)
T4SS GI-like PSF113_3314-3334
T5aSS PSF113_2779
PSF113_2780
PSF113_4399
estA (PSF113_5339)
PSF113_5848
T5bSS PSF113_0792-0793
PSF113_1489-1490
PSF113_4466-4468
PSF113_2623-PSF113_3702
T5dSS plpD (PSF113_1517)
T6SS I HSI-II (PSF113_5815-5833) hcp2 (PSF113_1976), PSF113_0495, PSF113_0666, PSF113_3144, PSF113_3904
III HSI-I (PSF113_5785-5808) vgrG1b (PSF113_2885)
IVA HSI-III (PSF113_2407-2422)

Redondo-Nieto et al.

Redondo-Nieto et al. BMC Genomics 2013 14:54   doi:10.1186/1471-2164-14-54

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