Table 4

Comparison of absolute PCR results with relative gene transcript abundance of Affymetrix Porcine Microarray
Microarray qPCR
Probe Set ID Gene Identifier Effect for artery Effect for age Age x artery interaction Effect for artery Effect for age Age x artery interaction
Ssc.17846.1.A1_at IRX1 <0.01 0.03 0.53 <0.01 <0.01 0.18
Ssc.27181.1.S1_at BMP3 <0.01 0.07 0.16 <0.01 <0.01 0.70
Ssc.1509.1.S1_at TNFRSF21 0.04 0.35 0.04 0.01 0.29 <0.01
Ssc.15995.2.S1_at KCNE1 0.04 0.38 0.72 <0.01 0.09 0.74
Ssc.19059.1.A1_at AGTR1 <0.01 0.87 0.20 <0.01 0.76 0.06
Ssc.12176.3.S1_at GPRC5C <0.01 0.80 0.24 <0.01 0.35 0.18
Ssc.17896.1.A1_at FHOD3 <0.01 0.12 0.87 <0.01 0.09 0.56
Ssc.10078.A1_at PCSK5 <0.01 0.22 0.11 <0.01 <0.01 <0.01
Ssc.17896.2.A1_at FHOD3 <0.01 0.09 0.77 0.19 0.03 0.43
RPLP0 0.42 0.22 0.41

Bahls et al.

Bahls et al. BMC Genomics 2013 14:443   doi:10.1186/1471-2164-14-443

Open Data