Table 1

Bioinformatic analysis of phosphorylated proteins detected by ProQ Diamond stain
Protein BLASTp description Plant species Predicted sites
Serine Threonine Tyrosine
putative plastid lipid-associated protein Arabidopsis thaliana 10 5 0
succinate dehydrogenase Oryza sativa 15 7 1
Putative cylase, Kynurenine formamidase first report 6 2 5
rubisco activase 2, chloroplastic isoform 1 Arabidopsis thaliana 5 3 6
soluble inorganic pyrophosphatase-like Arabidopsis thaliana, Madicago truncatula, Oryza sativa 5 1 4
similar to HSC70-1 (heat shock cognate 70 kDa protein 1); ATP binding isoform 1 Arabidopsis thaliana, Glycine max, Medicago truncatula, Oryza sativa 15 14 5
ascorbate peroxidase Arabidopsis thaliana, Brassica napus, Oryza sativa 4 3 3
putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Arabidopsis thaliana, Glycine max, Oryza sativa 12 4 12
cell division cycle protein 48 homolog Arabidopsis thaliana, Brassica napus, Madicago truncatula, Oryza sativa 24 9 4
mitochondrial-processing peptidase subunit alpha Oryza sativa 18 6 7
Peroxiredoxin-2B first report 5 1 0
oxygen-evolving enhancer protein 2 23-kDa polypeptide of photosystem II Arabidopsis thaliana, Brassica napus 8 3 4
actin-101 Arabidopsis thaliana, Oryza sativa 10 6 7
ribulose bisphosphate carboxylase/oxygenase activase Arabidopsis thaliana, Brassica napus, Madicago truncatula, Oryza sativa 7 5 6
probable ribose-5-phosphate isomerase Arabidopsis thaliana 15 3 2
auxin-induced protein PCNT115 isoform 1 Oryza sativa 5 5 4
ribulose 1,5-bisphosphate carboxylase/oxygenase large subunit Arabidopsis thaliana 7 3 3
sedoheptulose-1,7-bisphosphatase, chloroplasic first report 21 7 2

Column 1: phospho-protein list. Column 2: BLAST analysis based on P3DB database showing previous report of the same phosphorylated proteins in other plant species. Column 3: number of predicted Serine/Threonine/Tyrosine phosphorylation sites by NetPhos 2.0.

Margaria et al.

Margaria et al. BMC Genomics 2013 14:38   doi:10.1186/1471-2164-14-38

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