Circular representation of the S. zoopedemicus ATCC35246 genome and comparative genome results. The ten circles (outer to inner) show the following. The outer three circles represent Sz35246 protein-encoding genes homologous to that of Sz10565, Sz70 and Se4047, respectively. The fourth circle represents the PAI in Sz35246 chromosome. The fifth circle shows the chromosome position scaled in kb from oriC. The sixth and seventh circles show the coding sequences on the plus and minus strands, respectively. All genes are color-coded based on the COG functional categories: cyan, information storage and processing; yellow, cellular processes and signaling; magenta, metabolism; and black, poorly characterized. The eighth circle shows rRNA in red and tRNA in blue. The ninth circle shows the GC content (in 1-kb windows).Values that are greater than and or less than the average (41.65%) are shown in green and red, respectively. The tenth circle shows the GC skew curve (10-kb window and 1-kb incremental shift). The values for plus and minus strands are shown in cobalt blue and purple, respectively.
Ma et al. BMC Genomics 2013 14:377 doi:10.1186/1471-2164-14-377