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Open Access Research article

Genome-wide analysis of the GH3 family in apple (Malus × domestica)

Huazhao Yuan, Kai Zhao, Hengjiu Lei, Xinjie Shen, Yun Liu, Xiong Liao and Tianhong Li*

Author Affiliations

Department of Fruit Science, College of Agriculture and Biotechnology/Key Laboratory of Stress Physiology and Molecular Biology for Tree Fruits of Beijing, China Agricultural University, 2 Yuanmingyuan West Road, Haidian District, Beijing, 100193, People’s Republic of China

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BMC Genomics 2013, 14:297  doi:10.1186/1471-2164-14-297

Published: 2 May 2013

Additional files

Additional file 1:

Real-time PCR primers used to amplify apple HistoneH3 and MdGH3 genes, and RT-PCR amplification primers.

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Additional file 2:

Multiple sequence alignments of full-length MdGH3s.

Format: DOCX Size: 1.6MB Download file

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Additional file 3:

Pairwise analysis of the overall identities of the full-length MdGH3 protein sequences.

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Additional file 4:

Promoter analysis of MdGH3 genes. Phytohormone and biotic/abiotic stress response elements are listed.

Format: XLSX Size: 14KB Download file

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Additional file 5:

AtGH3 expression patterns under phytohormone and biotic/abiotic stress.

Format: DOCX Size: 48KB Download file

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Additional file 6:

Real-time PCR analysis of MdGH3 expression in the leaves and roots of M. sieversii.

Format: DOC Size: 41KB Download file

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Additional file 7:

Real-time PCR analysis of MdGH3 expression in the leaves and roots of plants subjected to phytohormone and abiotic stress.

Format: XLSX Size: 15KB Download file

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Additional file 8:

GUS activity assays of whole DR5::GUS transgenic seedlings subjected to phytohormone and abiotic stress treatments.

Format: DOC Size: 40KB Download file

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Open Data