Table 1

Summary of sequencing and assembly results
C21 (number) Mean length (bp) N50 (bp) T43 (number) Mean length (bp) N50 (bp)
Raw reads 26512992 28166582
Clean reads 25555558 27266668
Contigs 459601 138 107 476229 138 106
Scaffolds 97752 341 475 101931 337 463
Unigenes 68076 559 437 71194 541 429
All-unigene Number: 65340 Mean length (bp): 770 N50 (bp): 562

Mean length: Mean length of assembled sequences.

N50: 50% of the assembled bases were incorporated into sequences with length of N50 or longer.

Dang et al.

Dang et al. BMC Genomics 2013 14:29   doi:10.1186/1471-2164-14-29

Open Data