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ContigScape: a Cytoscape plugin facilitating microbial genome gap closing

Biao Tang12, Qi Wang36, Minjun Yang2, Feng Xie3, Yongqiang Zhu2, Ying Zhuo3, Shengyue Wang2, Hong Gao3, Xiaoming Ding1, Lixin Zhang3*, Guoping Zhao1245* and Huajun Zheng2*

Author Affiliations

1 State Key Laboratory of Genetic Engineering, Department of Microbiology, School of Life Sciences, Fudan University, Shanghai, 200433, China

2 Shanghai-MOST Key Laboratory of Health and Disease Genomics, Chinese National Human Genome Center at Shanghai, Shanghai, 201203, China

3 CAS Key Laboratory of Pathogenic Microbiology & Immunology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100190, China

4 CAS Key Laboratory of Synthetic Biology, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, 200032, China

5 Department of Microbiology and Li KaShing Institute of Health SciencesThe Chinese University of Hong Kong, Prince of Wales Hospital, Shatin, New Territories, Hong Kong SAR, China

6 Graduate School of Chinese Academy of Sciences, Beijing, 100049, China

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BMC Genomics 2013, 14:289  doi:10.1186/1471-2164-14-289

Published: 30 April 2013

Additional files

Additional file 1:

Listing all links of ContigScape, user manual and test datasets.

Format: DOCX Size: 18KB Download file

Open Data