Table 1

Sequencing, assembly and data analysis
Raw results (after trimming) Assembly results
Total number of reads 822 891 Total number of isotigs 31 623
Total read length (bp) 295 125 234 Total isotigs length (bp) 21 076 176
Minimum read length (bp) 50 Isotig N50 (bp) 744
Median read length (bp) 384 Maximum isotig length (bp) 3537
Maximum read length (bp) 578 Mean depth 28.2
Mean read length (bp) 358 Number of singletons 17 853
GC content (%) 43.2 Total number of unigenes 46 584

Niu et al.

Niu et al. BMC Genomics 2013 14:263   doi:10.1186/1471-2164-14-263

Open Data