Open Access Highly Accessed Research article

Multilevel comparative analysis of the contributions of genome reduction and heat shock to the Escherichia coli transcriptome

Bei-Wen Ying1, Shigeto Seno1, Fuyuro Kaneko1, Hideo Matsuda1 and Tetsuya Yomo123*

Author Affiliations

1 Graduate School of Information Science and Technology, Osaka University, 1-5 Yamadaoka, Suita, Osaka, 565-0871, Japan

2 Graduate School of Frontier Biosciences, Osaka University, 1-5 Yamadaoka, Suita, Osaka, 565-0871, Japan

3 Exploratory Research for Advanced Technology (ERATO), Japan Science and Technology Agency (JST), Suita, Osaka, 565-0871, Japan

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BMC Genomics 2013, 14:25  doi:10.1186/1471-2164-14-25

Published: 16 January 2013

Additional files

Additional file 1:

Figure S1. Chromosomal locations of the DEGs. Figure S2. Statistical analysis. Figure S3. Genes of unknown function. Figure S4. A close-up view of the transition in major peaks.

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Additional file 2:

Table S1. Detailed results of the gene set enrichment analysis.

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Additional file 3:

Table S2. List of the DEGs.

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Additional file 4:

Table S3. Analysis of the enriched gene categories.

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