Table 1

Genes comprising PKPP1
Locus Annotation Mean ± SD (−Pi/+Pi; P < 0.01)
AT1G01450 Protein kinase superfamily protein 1.93 ± 0.92
AT1G23540 AtPERK12, IGI1, Protein kinase superfamily protein 1.60 ± 0.38
AT1G29230 ATCIPK18, ATWL1, CIPK18, SnRK3.20, WL1, CBL-interacting protein kinase 18 1.50 ± 0.45
AT1G61440 S-locus lectin protein kinase family protein 1.99 ± 0.51
AT2G29000 Leucine-rich repeat protein kinase family protein 3.03 ± 0.79
AT3G04690 ANX1, Malectin/receptor-like protein kinase family protein 1.36 ± 0.08
AT3G24715 Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain 0.65 ± 0.03
AT4G13000 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein 3.65 ± 0.62
AT5G18910 Protein kinase superfamily protein 2.19 ± 0.47
AT2G18130 ATPAP11, PAP11, purple acid phosphatase 11 (De novo synthesis)
AT1G08590 Leucine-rich receptor-like protein kinase family protein 0.87 ± 0.04
AT1G61860 Protein kinase superfamily protein 1.39 ± 0.02
AT5G51270 U-box domain-containing protein kinase family protein 1.33 ± 0.13
AT5G61550 U-box domain-containing protein kinase family protein 3.52 ± 0.39
AT4G31250 Leucine-rich repeat protein kinase family protein 1.75 ± 0.12
AT4G25160 U-box domain-containing protein kinase family protein 6.13 ± 1.12
AT2G35890 CPK25, calcium-dependent protein kinase 25 1.39 ± 0.08
AT1G70460 RHS10, root hair specific 10 1.43 ± 0.18
AT1G79250 AGC1.7, AGC kinase 1.7 1.98 ± 0.44
AT5G62310 IRE, AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein 1.38 ± 0.25
AT2G41970 Protein kinase superfamily protein 1.38 ± 0.13
AT1G16440 RSH3, root hair specific 3 1.42 ± 0.17

Co-expression network PKPP1 (Protein Kinase Protein Phosphatase) is composed of 22 genes most of which are induced by Pi deficiency (P < 0.01).

Lan et al.

Lan et al. BMC Genomics 2013 14:210   doi:10.1186/1471-2164-14-210

Open Data