Table 3

Genes responsive in all four cyanobacteria species
KO_ID Name Taxon Gene Module Module cor Fold change (log2) p-value
K01737 6-pyruvoyl tetrahydrobiopterin synthase PMM PMM0106 turquoise -0.755 -0.5 0.024
PMT PMT0164 turquoise -0.611 0.3 0.0009
SYW SYNW1504 black 0.791 1.5 0.013
SYG sync_1898 brown 0.977 0.2 0.002
K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase PMM PMM0266 magenta 0.714 0.3 0.028
PMT PMT1857 purple 0.613 0.3 0.025
SYG sync_0289 turquoise -0.806 -0.4 0.0001
SYW SYNW0249 greenyellow -0.957 -0.6 0.029
K00030 isocitrate dehydrogenase (NAD+) PMM PMM1596 magenta 0.714 0.4 0.008
PMT PMT1935 turquoise -0.611 -0.2 0.006
SYG sync_0214 pink 0.757 -0.5 0.002
SYW SYNW0166 yellow -0.964 -0.5 0.001
K03588 cell division protein FtsW PMM PMM1458 green 0.661 -0.6 0.023
PMT PMT1475 turquoise -0.611 -0.2 0.027
SYG sync_2326 turquoise -0.806 -0.3 0.012
SYW SYNW0475 yellow -0.964 -0.2 0.011
K05371 phycocyanobilin:ferredoxin oxidoreductase PMM PMM0747 cyan 0.743 -0.3 0.0003
PMT PMT0590 pink 0.695 0.3 0.026
SYG sync_1656 turquoise -0.806 -0.4 0.0011
SYW SYNW1084 brown 0.869 0.2 0.048618
K01299 carboxypeptidase Taq (M32) metallopeptidase PMM PMM0493 red -0.813 -0.8 0.015
PMT PMT1279 greenyellow -0.955 -0.3 0.0005
SYG sync_2040 purple -0.808 -0.4 0.0008
SYW SYNW1098 greenyellow -0.957 0.3 6.78E-05
--- LysM domain PMM PMM0330 turquoise -0.755 0.7 0.003
PMT PMT0190 turquoise -0.611 -0.2 0.004
SYG sync_0565 brown 0.977 -0.7 2.19E-05
SYW SYNW1957 yellow -0.964 -0.3 0.0007
--- ABC transporter, ATP binding component PMM PMM0290 red -0.813 0.4 0.002
PMT PMT1635 turquoise -0.611 -0.3 0.005
SYG sync_2588 darkturquoise -0.746 -0.2 0.0207
SYW SYNW0320 black 0.791 0.7 0.015
K02639 ferredoxin PMM PMM0898 red -0.813 -0.1 0.035
PMT PMT1429 purple 0.613 0.6 0.011
SYG sync_1953 turquoise -0.806 -0.6 0.006
SYW SYNW1277 midnightblue -0.722 0.4 0.012

Wang et al.

Wang et al. BMC Genomics 2013 14:112   doi:10.1186/1471-2164-14-112

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