Table 2 |
|||||||||||
| Analyses of associations between markers per exact Fisher test for the different genetic groups considered | |||||||||||
| Diversity group | Number of individuals | Number of polymorphic markers | Number of 2-by-2 tests | Limit(5%)after Bonferroni’s correction | Number of significant associations(exact test) | Number of significant within-linkage group associations and percentage compared to the total significant associations | Number of significant between-linkage group associations and percentage compared to the total significant associations | Within-linkage group: Between-linkage group ratio | |||
| All genotypes | 356 | 108 | 5778 | 8.65351E-06 | 5684 | 98% | 680 | 12% | 5004 | 88% | 0.14 |
| C | 92 | 98 | 4753 | 1.05197E-05 | 72 | 2% | 62 | 86% | 10 | 14% | 6.20 |
| SG1 | 16 | 93 | 4278 | 1.16877E-05 | 177 | 4% | 29 | 16% | 148 | 84% | 0.20 |
| SG2 | 85 | 107 | 5671 | 8.81679E-06 | 389 | 7% | 144 | 37% | 245 | 63% | 0.59 |
| Pélézi | 35 | 74 | 2701 | 1.85117E-05 | 116 | 4% | 85 | 73% | 31 | 27% | 2.74 |
| G | 128 | 97 | 4656 | 1.07388E-05 | 483 | 10% | 99 | 20% | 384 | 80% | 0.26 |
| G sub1 | 54 | 85 | 3570 | 1.40056E-05 | 73 | 2% | 49 | 67% | 24 | 33% | 2.04 |
| G sub2 | 17 | 73 | 2628 | 1.90259E-05 | 38 | 1% | 32 | 84% | 6 | 16% | 5.33 |
| G sub3 | 57 | 96 | 4560 | 1.09649E-05 | 36 | 1% | 20 | 56% | 16 | 44% | 1.25 |
Cubry et al. BMC Genomics 2013 14:10 doi:10.1186/1471-2164-14-10
