Additional file 5.

The mutation rates for CHG and CHH sites with different methylation levels. The X-axis includes CHH and CHG sites with different methylation levels (mC: methylated site; H_mC: highly methylated site (> 80%); HI_mC: high-intermediately methylated site (60-80%); I_mC: intermediately methylated site (40-60%); LI_mC: low-intermediately methylated site (20-40%); L_mC: lowly methylated site (≤ 20%)). The Y-axis is the mutation rate that was calculated as the density of SNPs at CHH and CHG sites.

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Xia et al. BMC Genomics 2012 13(Suppl 8):S7   doi:10.1186/1471-2164-13-S8-S7