Table 3

First 10 genes retrieved by GLAD4U and not listed in the gold standard lists

Rank

Entrez-Gene ID

(Gene symbol)

Score

PMIDs*


Apoptosis


41

4193 (MDM2)

53.5212

21051655, 21051533, 20849854, 20849851, 20832750, 20822933, 20708156, 20659896, 20657550, 20644561


48

1432 (MAPK14)

40.8288

20736797, 20573801, 20558744, 20473571, 20463961, 20430109, 20393480, 20345980, 20307495, 20299663


49

4609 (MYC)

37.27.98

20714214, 20598117, 20596624, 20573831, 20564213, 20515470, 20232342, 20071475, 19996270, 19966300


54

6774 (STAT3)

35.2695

20562100, 20514402, 20507639, 20490331, 20459702, 20447714, 20213502, 20197401, 20164027, 20154216


77

5580 (PRKCD)

23.3017

20548952, 20547768, 20471435, 20093486, 19932628, 19917613, 19875824, 19833733, 19808702, 19747914


78

29126 (CD274)

23.1218

20636820, 20617899, 20587542, 20506224, 20445553, 20363965, 19916867, 19826049, 19811426, 19794071


79

142 (PARP1)

22.9308

20940411, 20665026, 20644561, 20629644, 20564216, 20453000, 20388712, 20181890, 20177052, 20072652


86

406991 (MIR21)

18.9856

20813833, 20515755, 20514462, 20447717, 20404348, 20372781, 20371612, 20346171, 20153722, 20148895


96

7295 (TXN)

16.1886

20619274, 20430109, 20298786, 20103619, 19671194, 19566940, 19328186, 19120277, 18983687, 18848838


100

3621 (ING1)

15.3784

19085961, 18836436, 18801192, 18691180, 18655775, 18533182, 18388957, 17585055, 17379210, 16607280


Hypertension


10

5972 (REN)

61.9237

20925572, 20662730, 20577119, 20537141, 20429690, 20223792, 20160196, 19891555, 19673942, 19536175


12

3291 (HSD11B2)

45.7032

20597806, 19811365, 19150652, 18837962, 18573267, 18178212, 17551100, 16872738, 16778331, 16109323


14

4879 (NPPB)

36.9570

20713912, 20368210, 20350538, 20346360, 20234137, 20142024, 20113292, 20102554, 20087954, 20083731


17

4524 (MTHFR)

32.2080

21072525, 21060006, 20960113, 20852445, 20812180, 20717043, 20669348, 20637366, 20592457, 20479155


19

1401 (CRP)

31.9446

21044781, 20805569, 20733302, 20683147, 20676960, 20346360, 20339115, 20184533, 20074254, 20068351


20

4878 (NPPA)

31.6082

20577119, 20543198, 20368210, 20346360, 20137368, 19635983, 19479237, 19430483, 19346663, 19330901


21

155 (ADRB3)

28.4824

20831043, 20144152, 20044737, 19842096, 19779464, 19479237, 19131662, 18724972, 18510051, 18088254


24

1584 (CYP11B1)

24.8304

20708777, 20339375, 19820005, 19567537, 19082699, 18663314, 18294861, 17980006, 17296872, 17121536


27

59272 (ACE2)

21.4649

20831027, 20813695, 20679547, 20349406, 20160196, 20117991, 19926873, 19684612, 19289653, 19286756


29

9370 (ADIPOQ)

19.6898

21044781, 20593932, 20552610, 20528971, 20516205, 20443850, 20385503, 20376890, 20166815, 20150538


* Only the 10 most recent supporting publications are shown here. See additional files 1 and 2 for the complete list of false-positive genes and their corresponding supporting publications.

Jourquin et al. BMC Genomics 2012 13(Suppl 8):S20   doi:10.1186/1471-2164-13-S8-S20

Open Data