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This article is part of the supplement: The International Conference on Intelligent Biology and Medicine (ICIBM) – Genomics

Open Access Research

A Bayesian decision fusion approach for microRNA target prediction

Dong Yue1, Maozu Guo2, Yidong Chen3 and Yufei Huang13*

Author Affiliations

1 Department of Electrical and Computer Engineering, University of Texas at San Antonio, San Antonio, Texas 78249, USA

2 Department of Computer Science and Engineering, Harbin Institute of Technology, Harbin 150001, China

3 Department of Epidemiology and Biostatistics, University of Texas Health Science Center at San Antonio, San Antonio, Texas 78229, USA

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BMC Genomics 2012, 13(Suppl 8):S13  doi:10.1186/1471-2164-13-S8-S13

Published: 17 December 2012

Additional files

Additional file 1:

The histogram of the positive pairs' miRanda scores and the fitted distribution. In the training data, 278 miRanda scores for the positive miRNA-target pairs are obtained. Its histogram is fitted with Negative Binomial distribution. The fitted distribution is represent by blue stars.

Format: PDF Size: 13KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data

Additional file 2:

The histogram of the positive pairs' PicTar scores and the fitted distribution. In the training data, 175 PicTar scores for the positive miRNA-target pairs are obtained. Its histogram is fitted with Gamma distribution. The fitted distribution is represent by blue stars.

Format: PDF Size: 13KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data

Additional file 3:

The histogram of the positive pairs' mirTarget scores and the fitted distribution. In the training data, 214 mirTarget scores for the positive miRNA-target pairs are obtained. Its histogram is fitted with Mixture Gaussian distribution. The fitted distribution is represent by blue stars.

Format: PDF Size: 13KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data

Additional file 4:

The histogram of the positive pairs' PITA scores and the fitted distribution. In the training data, 631 PITA scores for the positive miRNA-target pairs are obtained. Its histogram is fitted with Gaussian distribution. The fitted distribution is represent by blue stars.

Format: PDF Size: 13KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data

Additional file 5:

The histogram of the positive pairs' Diana-microT scores and the fitted distribution. In the training data, 396 Diana-microT scores for the positive miRNA-target pairs are obtained. Its histogram is fitted with Exponential distribution. The fitted distribution is represent by blue stars.

Format: PDF Size: 15KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data

Additional file 6:

The histogram of the negative pairs' miRanda scores and the fitted distribution. In the training data, 1230 miRanda scores for the negative miRNA-target pairs are obtained. Its histogram is fitted with Negative Binomial distribution. The fitted distribution is represent by blue stars.

Format: PDF Size: 13KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data

Additional file 7:

The histogram of the negative pairs' PicTar scores and the fitted distribution. In the training data, 613 PicTar scores for the negative miRNA-target pairs are obtained. Its histogram is fitted with Gamma distribution. The fitted distribution is represent by blue stars.

Format: PDF Size: 14KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data

Additional file 8:

The histogram of the negative pairs' mirTarget scores and the fitted distribution. In the training data, 436 mirTarget scores for the negative miRNA-target pairs are obtained. Its histogram is fitted with Exponential distribution. The fitted distribution is represent by blue stars.

Format: PDF Size: 13KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data

Additional file 9:

The histogram of the negative pairs' PITA scores and the fitted distribution. In the training data, 8831 PITA scores for the negative miRNA-target pairs are obtained. Its histogram is fitted with Gaussian distribution. The fitted distribution is represent by blue stars.

Format: PDF Size: 14KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data

Additional file 10:

The histogram of the negative pairs' Diana-microT scores and the fitted distribution. In the training data, 3254 Diana-microT scores for the negative miRNA-target pairs are obtained. Its histogram is fitted with Exponential distribution. The fitted distribution is represent by blue stars.

Format: PDF Size: 16KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data