Table 3

Average precision for the union (+) of two methods.

x + y

Average precision

Number

of regions


Score combination

Rank combination


E + F = CisGenome + SISSRs

0.8114

0.7997

26371

D + E = QuEST + CisGenome

0.8190

0.8158

26457

D + F = QuEST + SISSRs

0.8204

0.8038

25574

C + D = PeakSeq + QuEST

0.8526

0.8475

22191

C + F = PeakSeq + SISSRs

0.8545

0.8559

22876

C + E = PeakSeq + CisGenome

0.8610

0.8522

24415

B + F = MACS + SISSRs

0.8880

0.8950

20767

B + D = MACS + QuEST

0.8883

0.8876

21242

B + E = MACS + CisGenome

0.8983

0.8977

20768

B + C = MACS + PeakSeq

0.8983

0.9033

19895

A + F = TRLocator + SISSRs

0.9126

0.9030

19673

A + B = TRLocator + MACS

0.9168

0.9158

20279

A + D = TRLocator + QuEST

0.9168

0.9071

20117

A + E = TRLocator + CisGenome

0.9193

0.9178

19720

A + C = TRLocator + PeakSeq

0.9199

0.9177

19281


Schweikert et al. BMC Genomics 2012 13(Suppl 8):S12   doi:10.1186/1471-2164-13-S8-S12

Open Data