Table 1

Preliminary analysis of the 407357 T. circumcincta ESTs.

T. circumcincta ESTs

Numbers (percentage)


Raw sequences obtained

407357

Cleaned sequences

366897 (90.06)

Clusters of multiple sequences (contigs)

22382 (5.4)

Clusters of singletons

17470 (4.2)

Total rESTs

39852 (9.7)

Putative peptides

24013 (60.25 % rESTs)


E/S proteins (cut-off: 0.5)

112


The contigs and singletons generated by preprocessing, overall representative ESTs (rESTs), peptides from conceptual translation and putative excretory-secretory (E/S) proteins identified are shown.

Menon et al. BMC Genomics 2012 13(Suppl 7):S10   doi:10.1186/1471-2164-13-S7-S10

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