Table 4

Summarizes the cost of running Atlas-INDEL2 on whole exome capture SOLiD and Illumina BAMs using Atlas2 Amazon.

SOLiD

Illumina

Time to upload (Hours)

3

1

Size of BAM (GB)

34.6

13.9

I/O (Millions)

0.9

1.8

Compute (Hours)

10.5

7.7

Storage Cost

4.84

1.95

I/O Cost

0.09

0.18

Compute Cost

3.74

2.72

Total Cost (USD)

8.67

4.85

Evani et al. BMC Genomics 2012 13(Suppl 6):S19   doi:10.1186/1471-2164-13-S6-S19