This article is part of the supplement: Selected articles from the IEEE International Workshop on Genomic Signal Processing and Statistics (GENSIPS) 2011

Open Access Research

Reducing confounding and suppression effects in TCGA data: an integrated analysis of chemotherapy response in ovarian cancer

Fang-Han Hsu1, Erchin Serpedin1, Tzu-Hung Hsiao3, Alexander JR Bishop34, Edward R Dougherty12* and Yidong Chen35*

Author Affiliations

1 Department of Electrical and Computer Engineering, Texas A&M University, College Station, TX, USA

2 Computational Biology Division, Translational Genomics Research Institute, Phoenix, AZ, USA

3 Greehey Children's Cancer Research Institute, University of Texas Health Science Center at San Antonio, San Antonio, TX, USA

4 Department of Cellular and Structural Biology, University of Texas Health Science Center at San Antonio, San Antonio, TX, USA

5 Department of Epidemiology and Biostatistics, University of Texas Health Science Center at San Antonio, San Antonio, TX, USA

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BMC Genomics 2012, 13(Suppl 6):S13  doi:10.1186/1471-2164-13-S6-S13

Published: 26 October 2012

Additional files

Additional file 1:

Supplementary figures and tables. This additional file contains supplementary figures and tables mentioned in the study, including Figures S1-S3 and Tables S1-S6.

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