Table 3

Comparison of the precisions, recalls and F-measures among the length-normalized edit distance, weighted edit distance using vc, and weighted edit distance using vn, when the F-measures were maximized

Method

Data

Precision

Recall

F-measure

Threshold


Edit

X

0.66857

0.61363

0.63992

<0.125

Distance

Y

0.46385

0.57731

0.51440

<0.21428


Weighted

X

0.69673

0.63461

0.66422

<0.08571

ED (vc)

Y

0.51077

0.53327

0.52177

<0.14117


Weighted

X

0.61412

0.65384

0.63336

<0.125

ED (vc)

Y

0.46225

0.60262

0.52318

<0.19473


Yamaguchi et al. BMC Genomics 2012 13(Suppl 3):S8   doi:10.1186/1471-2164-13-S3-S8

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