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This article is part of the supplement: Selected articles from the IEEE International Conference on Bioinformatics and Biomedicine 2011: Genomics

Open Access Proceedings

Genome-wide search for miRNA-target interactions in Arabidopsis thaliana with an integrated approach

Jiandong Ding12, Danqing Li12, Uwe Ohler34, Jihong Guan5 and Shuigeng Zhou12*

Author Affiliations

1 Shanghai Key Lab of Intelligent Information Processing, Fudan University, Shanghai, China

2 School of Computer Science, Fudan University, Shanghai, China

3 Institute for Genome Sciences & Policy, Duke University, Durham, North Carolina, USA

4 Department of Biostatistics & Bioinformatics, Duke University, Durham, North Carolina, USA

5 Department of Computer Science & Technology, Tongji University, Shanghai, China

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BMC Genomics 2012, 13(Suppl 3):S3  doi:10.1186/1471-2164-13-S3-S3

Published: 11 June 2012

Additional files

Additional file 1:

All 142 experimentally validated Arabidopsis thaliana miRNA target interactions. These MTIs are collected from previous studies and an existing database.

Format: XLS Size: 52KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data

Additional file 2:

All 12 additional tables are compiled into one file. These tables give more details of figures shown in this article and support our conclusions.

Format: XLS Size: 56KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data