Table 1

Marine adaptation genes

Species

MAG status

Functional class

Subtotal

Comparative genomics

Total


ETS

(complex I)

Na+ transport

ABC transport

Channels and pores

Gene gain

Gene loss


S. tropica

Candidate

35

18

225

35

313

105

4

422

S. tropica

Final

13 (2 operons)

3

9 (2 operons)

30

55

7

1*

60**

S. arenicola

Candidate

35

19

225

33

312

105

4

421

S. arenicola

Final

13 (2 operons)

3

9 (2 operons)

28

53

7

1*

58**


MAGs identified based on functional class and comparative genomics.

*Based on annotation.

**Total is not additive because 3 of 7 genes in the gene gain category were also found in the finvtional analyses.

ETS: electron transport system.

Penn and Jensen BMC Genomics 2012 13:86   doi:10.1186/1471-2164-13-86

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