Mapping summary of RNA-Seq reads and transcriptional distribution in P. pastoris genome. (A) Statistics of RNA-Seq reads mapped in P. pastoris genome. Uniquely mapped reads include the reads located in exons, introns and intergenic regions. (B) Box-and-whisker plots of log2-transformed RPKM for the following regions: intergenic regions, introns, exons and novel transcripts. Diamonds represent data outside of the 5th or 95th percentile. (C) Expression profile denoted by log2-transformed reads count, depicting the transcriptionally active region (TAR) in the P. pastoris genome. “Coverage” depicts the percentage of the P. pastoris genome covered by RNA-Seq reads, and “Gene” depicts the number of BOGAS P. pastoris genes in a window size of 6 kilobases. The chromosome numbers are shown on the left.
Liang et al. BMC Genomics 2012 13:738 doi:10.1186/1471-2164-13-738