Table 4

Expression values of genes involved in starch metabolism
Gene ID Name DSM annotation N402 B36 Fold-change B36/N402 P FDR
An04g06910 amyR transcription factor of starch utilization amyR - Aspergillus niger 1176 748 0.64 1.06E-06 3.06E-05
An11g03340 aamA acid alpha-amylase - Aspergillus niger 3782 858 0.23 1.24E-09 1.48E-07
An04g06920 agdA extracellular alpha-glucosidase aglU - Aspergillus niger 12052 7257 0.60 7.55E-08 4.07E-06
An01g10930 agdB strong similarity to enzyme with sugar transferase activity from patent JP11009276-A - Acremonium sp. 5808 2634 0.45 2.27E-09 2.40E-07
An03g06550 glaA glucan 1,4-alpha-glucosidase glaA - Aspergillus niger 21376 26346 1.23* 3.94E-04 3.80E-03
An04g06930 amyC strong similarity to extracellular alpha-amylase amyA/amyB - Aspergillus niger 529 288 0.54 7.68E-08 4.13E-06
An04g06920 aglU extracellular alpha-glucosidase aglU - Aspergillus niger 12052 7257 0.60 7.55E-08 4.07E-06
An09g03100 amyA strong similarity to alpha-amylase precursor amy - Aspergillus niger 359 115 0.32 7.34E-08 3.99E-06

*Fold difference in glaA is under-estimated due to the saturation of array signals. Transcript level of glaA in B36 was about 7-fold higher than N402 based on qPCR results.

Kwon et al.

Kwon et al. BMC Genomics 2012 13:701   doi:10.1186/1471-2164-13-701

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