Additional file 9.
Differentially-expressed genes between the Nov. 15 and Feb. 15 libraries. Genelength: length of all exon in gene. Expression: unique reads of aligned reads. RPKM: Reads Per Kb per Million reads. log2 Ratio: log2 (Feb. 15-RPKM/Nov. 15-RPKM). Up-Down-Regulation (Feb. 15/Nov. 15): Feb. 15 is a up/down regulation relative to Nov. 15. P-value: pvalue for hypothesis testing. FDR: false discovery rate. We used FDR ≤ 0.001 and the absolute value of log2 Ratio ≥ 1 as the threshold to judge the significance of gene expression difference.
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Liu et al. BMC Genomics 2012 13:700 doi:10.1186/1471-2164-13-700