Table 3

Transcripts over-expressed at a single developmental stage
Young berries (E-L 31) Early-veraison (E-L 35) Late-veraison (E-L 36) Harvest (E-L 38) Total Veraison
> 50-fold higher 282 1 0 65 348 3
10-50 fold higher 789 31 1 175 996 60
3-10 fold higher 1 814 162 58 807 2 841 312
Total 2 885 194 59 1 047 4 185 375

The numbers of transcripts significantly up-regulated in berries at a single developmental stage relative to all other samples. Fold changes are calculated compared with a minimum RPKM value of 0.1. Given the similarity in transcript expression patterns between early and late-veraison (E-L 35 and E-L 36), the relative expression of transcripts in both of these stages compared with E-L 31 and E-L 38 are reported in the separated column “veraison”.

Sweetman et al.

Sweetman et al. BMC Genomics 2012 13:691   doi:10.1186/1471-2164-13-691

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