Flowchart of the P2TF process. Proteomes are screened for the presence of conserved domains using SMART and Pfam domain profiles. Proteins with hits to appropriate domain profiles are then assigned to specific categories and sub-categories of TFs, and annotated with domain architecture and classification results. The results of the TF analysis can then be viewed as an interactive webpage or exported in a user-defined format.
Ortet et al. BMC Genomics 2012 13:628 doi:10.1186/1471-2164-13-628