Table 1

Summary of the Anabaena sp. 90 genome
Length (bp) * Errors/Mb GC (%) # ORFs # RNAs
Total Hypothetical (%) Pseudogene (%) rRNA tRNA
Chromosome I 4,329,264 0.02 38.1 3,817 1,414 (37.04) 169 (4.43) 15 40
Chromosome II 819,965 0.03 38.2 755 256 (33.91) 49 (6.49) 0 4
Plasmid A 80,384 0.03 37.2 93 71 (76.34) 5 (5.38) 0 0
Plasmid B 56,037 0.01 37.3 51 23 (45.10) 4 (7.84) 0 0
Plasmid C 20,025 0 37.42 22 20 (90.91) 0 (0) 0 0
Total 5,305,675 0.022 38.1 4,738 1,784 (37.65) 227 (4.79) 15 44

* Each called read base was assigned a Phred score that is logarithmically related to its error probabilities [76,77]. The error rate of each replicon was determined as the sum of the error probabilities over all assembled bases.

Wang et al.

Wang et al. BMC Genomics 2012 13:613   doi:10.1186/1471-2164-13-613

Open Data