Open Access Research article

Comparative mapping in intraspecific populations uncovers a high degree of macrosynteny between A- and B-genome diploid species of peanut

Yufang Guo12, Sameer Khanal1, Shunxue Tang1, John E Bowers1, Adam F Heesacker1, Nelly Khalilian1, Ervin D Nagy1, Dong Zhang1, Christopher A Taylor1, H Thomas Stalker3, Peggy Ozias-Akins2* and Steven J Knapp1

Author Affiliations

1 Institute of Plant Breeding, Genetics, and Genomics, 111 Riverbend Road, The University of Georgia, Athens, GA, 30602, USA

2 Department of Horticulture, The University of Georgia, Tifton, GA, 31973, USA

3 Department of Crop Science, North Carolina State University, Raleigh, NC, 27695, USA

For all author emails, please log on.

BMC Genomics 2012, 13:608  doi:10.1186/1471-2164-13-608

Published: 10 November 2012

Additional files

Additional file 1:

Summary of EST database for SSR discovery.

Format: DOC Size: 38KB Download file

This file can be viewed with: Microsoft Word Viewer

Open Data

Additional file 2:

List of peanut EST-SSRs.

Format: XLS Size: 480KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data

Additional file 3:

Overview of EST-SSR amplification.

Format: DOCX Size: 14KB Download file

Open Data

Additional file 4:

Summary of marker polymorphism among peanut genotypes.

Format: DOCX Size: 15KB Download file

Open Data

Additional file 5:

Effect of SSR length on frequency of polymorphism among tetraploid and diploid genotypes.

Format: PDF Size: 51KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data

Additional file 6:

Arachis germplasm screened for genomic SSR markers developed from GSS sequences.

Format: DOC Size: 35KB Download file

This file can be viewed with: Microsoft Word Viewer

Open Data

Additional file 7:

Peanut genomic SSR primer pair sequences used in this study.

Format: XLS Size: 178KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data

Additional file 8:

The distribution of distorted loci along linkage groups for the B- genome map.

Format: PDF Size: 212KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data