Open Access Research article

The unique architecture and function of cellulose-interacting proteins in oomycetes revealed by genomic and structural analyses

Mathieu Larroque12, Roland Barriot34, Arnaud Bottin12, Annick Barre125, Pierre Rougé125, Bernard Dumas12 and Elodie Gaulin12*

Author Affiliations

1 Université de Toulouse, UPS, Laboratoire de Recherche en Sciences Végétales, 24 chemin de Borde Rouge, BP42617, Auzeville, Castanet-Tolosan, F-31326, France

2 CNRS, Laboratoire de Recherche en Sciences Végétales, 24 chemin de Borde Rouge, BP42617, Auzeville, Castanet-Tolosan F-31326, France

3 Université de Toulouse, UPS, Laboratoire de Microbiologie et Génétique Moléculaire, Toulouse F-31000, France

4 Centre National de la Recherche Scientifique; LMGM, Toulouse F-31000, France

5 Present address: Université de Toulouse, UPS, Laboratoire PHARMA-DEV IRD UMR 152, 35 Chemin des Maraîchers, Toulouse 31400, France

For all author emails, please log on.

BMC Genomics 2012, 13:605  doi:10.1186/1471-2164-13-605

Published: 9 November 2012

Additional files

Additional file 1:

Table S1. List of fungal and oomycete species used in the current study. The phylogenetic classification of the species and the source of the data are indicated in the table.

Format: PDF Size: 80KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data

Additional file 2:

Table S2. Alias used for domain organization of CBM1-containing proteins. The IPR number of individual domain appended to CBM1 is indicated, and the corresponding alias used to perform the heat-map of the distribution of architectures among fully sequenced fungi and oomycetes.

Format: PDF Size: 74KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data