Table 1

Summary of transcriptome data for Rana chensinensis and R. kukunoris
R. chensinensis R. kukunoris
raw assemblies final assembly raw assemblies final assembly
Total number of reads 67,676,712 66,476,534
Read length (bp) 90 90
Total length of reads (bp) 6,090,904,080 5,982,888,060
Total length of assembly (Mb) 742.5 38.1 751.4 37.6
Total sequences of assembly 1,624,822 41,858 1,521,607 39,293
N50 length of assembly (bp) 515 1,333 586 1,485
Mean length of assembly(bp) 456 909 493 956
Median length of assembly(bp) 325 599 340 601
Total number of transcripts 41,858 39,293
Transcript annotated 16,738 16,549
Number of unique genes represented 11,179 11,140
Number of putative orthologs 7069

bp=base pair; Mb=mega base pairs.

Yang et al.

Yang et al. BMC Genomics 2012 13:588   doi:10.1186/1471-2164-13-588

Open Data