Table 1 |
||||
| Summary of transcriptome data for Rana chensinensis and R. kukunoris | ||||
| R. chensinensis | R. kukunoris | |||
| raw assemblies | final assembly | raw assemblies | final assembly | |
| Total number of reads | 67,676,712 | 66,476,534 | ||
| Read length (bp) | 90 | 90 | ||
| Total length of reads (bp) | 6,090,904,080 | 5,982,888,060 | ||
| Total length of assembly (Mb) | 742.5 | 38.1 | 751.4 | 37.6 |
| Total sequences of assembly | 1,624,822 | 41,858 | 1,521,607 | 39,293 |
| N50 length of assembly (bp) | 515 | 1,333 | 586 | 1,485 |
| Mean length of assembly(bp) | 456 | 909 | 493 | 956 |
| Median length of assembly(bp) | 325 | 599 | 340 | 601 |
| Total number of transcripts | 41,858 | 39,293 | ||
| Transcript annotated | 16,738 | 16,549 | ||
| Number of unique genes represented | 11,179 | 11,140 | ||
| Number of putative orthologs | 7069 | |||
bp=base pair; Mb=mega base pairs.
Yang et al. BMC Genomics 2012 13:588 doi:10.1186/1471-2164-13-588
