Table 1

Description of strains used in this study.

Species

anamorph (teleomorph*)

Phylum

Family

Original number

Strain ref number

CIRM number


T.rees.

Trichoderma reesei (Hypocrea jecorina)

Ascomycota

Hypocreaceae

QM6a

CBS 383.78

BRFM 1104

P.blak.

Phycomyces blakesleeanus

Zygomycota

Phycomycetaceae

NRRL 1555

FGSC 10004

BRFM 1098

R.oryz.

Rhizopus oryzae (R. arrhizus)

Zygomycota

Mucoraceae

RA 99-880

FGSC 9543

BRFM 1095

M.circ.

Mucor circinelloides f lusitanicus

Zygomycota

Mucoraceae

NRRL 3631

CBS 277.49

BRFM 1099

U. may.

Ustilago maydis

Basidiomycota

Ustilaginaceae

UM521

FGSC 9021

BRFM 1093

P.chry.

Phanerochaete chrysosporium

Basidiomycota

Phanerochaetaceae

RP 78

FGSC 9002

BRFM 1090

T. stip.

Penicillium emmonsii (Talaromyces stipitatus)

Ascomycota

Trichocomaceae

NRRL 1006

CBS 375.48

BRFM 1102

A.fisc.

Aspergillus fischeri (Neosartorya fischeri)

Ascomycota

Trichocomaceae

NRRL 181

CBS 544.65

BRFM 1101

A.nig.

Aspergillus niger

Ascomycota

Trichocomaceae

ATCC 1015

FGSC A1144

BRFM 1087

A.ter.

Aspergillus terreus

Ascomycota

Trichocomaceae

NIH 2624

FGSC A1156

BRFM 1088

A.flav.

Aspergillus flavus

Ascomycota

Trichocomaceae

NRRL 3357

FGSC A1120

BRFM 1086

A.clav.

Aspergillus clavatus

Ascomycota

Trichocomaceae

NRRL 1

CBS 513.65

BRFM 1100

A.fumi.

Aspergillus fumigatus

Ascomycota

Trichocomaceae

AF 293

FGSC A1100

BRFM 1085

A.nid.

Aspergillus nidulans (Emericella nidulans)

Ascomycota

Trichocomaceae

M 139

FGSC A4

BRFM 1084

F.oxy.

Fusarium oxysporum f lycopersici

Ascomycota

Nectriaceae

NRRL 34936

FGSC 9935

BRFM 1097

N.haem.

Fusarium solani (Nectria haematococca)

Ascomycota

Nectriaceae

77-13-4

FGSC 9596

BRFM 1096

F.gra.

Fusarium graminearum (Gibberella zeae)

Ascomycota

Nectriaceae

NRRL 31084

FGSC 9075

BRFM 1094

F. ver.

Fusarium verticillioides (Gibberella moniliformis)

Ascomycota

Nectriaceae

A-00149

FGSC 7600

BRFM 1089

C.glob.

Chaetomium globosum

Ascomycota

Chaetomiaceae

NRRL1870

CBS 148.51

BRFM 1103

N.cras.

Neurospora crassa

Ascomycota

Sordariaceae

OR74A

FGSC 9013

BRFM 1092


*when available, **industrial enzymatic cocktail T. reesei CL847

Couturier et al. BMC Genomics 2012 13:57   doi:10.1186/1471-2164-13-57

Open Data