Table 4

A selection of transporter families of P. acidipropionici and close related genomes
TC system Description Number of proteins found in:
P. acidipropionici P. acnes P. freudenreichii M. phosphovorus
1.C.70 CAMP Factor 0 5 0 0
2.A.1 Major Facilitator Superfamily 38 21 36 68
2.A.1.1 Sugar Porter (SP) 8 5 5 8
2.A.1.3 Drug:H + Antiporter-2 (14 Spanner) (DHA2) 10 3 12 21
2.A.1.6 Metabolite:H + Symporter (MHS) 7 2 4 10
2.A.13 C4-Dicarboxylate Uptake 0 2 2 0
2.A.2 Glycoside-Pentoside-Hexuronide :Cation Symporter 4 1 1 1
2.A.3 Amino Acid-Polyamine-Organocation 12 12 10 6
2.A.47 Divalent Anion:Na+ 0 0 2 1
2.A.66 Multidrug/Oligosaccharidyl-lipid/Polysaccharide Flippase 5 1 1 2
3.A.1 ATP-binding Cassette (ABC) 220 137 105 219
3.A.1.1 Carbohydrate Uptake Transporter-1 (CUT1) 57 29 7 40
3.A.1.2 Carbohydrate Uptake Transporter-2 (CUT2) 17 7 4 9
3.A.1.3 Polar Amino Acid Uptake Transporter (PAAT) 19 5 8 11
3.A.1.4 Hydrophobic Amino Acid Uptake Transporter (HAAT) 5 0 5 5
3.A.1.5 Peptide/Opine/Nickel Uptake Transporter (PepT) 28 14 9 29
3.A.1.12 Quaternary Amine Uptake Transporter (QAT) 13 6 7 6
3.A.11 Bacterial Competence-related DNA Transformation Transporter 0 2 2 2
3.B.1 Na + −transporting Carboxylic Acid Decarboxylase 7 3 4 4
4.A.1 PTS Glucose-Glucoside 1 8 1 0
4.A.2 PTS Fructose-Mannitol 2 4 0 0
4.A.3 PTS Lactose-N.N′-Diacetylchitobiose-β-glucoside 0 3 0 0
4.A.4 PTS Glucitol 5 4 0 0
4.A.5 PTS Galactitol 4 2 0 0
4.A.6 PTS Mannose-Fructose-Sorbose 0 0 1 0
4.A.7 PTS L-Ascorbate 0 2 0 0
5.A.3 Prokaryotic Molybdopterin-containing Oxidoreductase 3 6 2 7
8.A.9 rBAT Transport Accessory Protein 4 2 2 6
9.A.10 Iron/Lead Transporter 5 0 2 5
9.A.40 HlyC/CorC Putative Transporters 4 2 2 2

Parizzi et al.

Parizzi et al. BMC Genomics 2012 13:562   doi:10.1186/1471-2164-13-562

Open Data