Table 1

Significantly enriched regions (SERs) and associated genes in each sample
H3K4me3 H3K27me3
Samples SERs (%) Genes SERs (%) Genes
Line-Specific 63I 647 (4.5) 78 3477 (13.9) 615
63N 594 (4.1) 71 2514 (10.1) 896
63I,63N 924 (6.4) 190 577 (2.3) 150
72I 105 (0.7) 16 1658 (6.6) 451
72N 126 (0.9) 11 2506 (10) 346
72I,72N 73 (0.5) 17 330 (1.3) 89
Condition-specific 63I,72I 97 (0.7) 35 2061 (8.3) 579
63N,72N 47 (0.3) 9 66 (0.3) 22
Ubiquitous 63I,63N,72I,72N 10691 (74.2) 9475 5831 (23.4) 2942
Total 14418 10206 24950 7904

63I: line 63 infected, 63N: line 63 control, 72I: line 72 infected, 72N: line 72 control.

Mitra et al.

Mitra et al. BMC Genomics 2012 13:557   doi:10.1186/1471-2164-13-557

Open Data