Table 4

List of hits obtained from PSI-BLAST after 4 iterations querying MOQ_006101 against GenBank non-redundant database
Species Description Accession CDD hit a % Identity BLAST E-value
Populus trichocarpa Predicted protein XP_002298511.1 Cas1_AcylT 38% 0
Arabidopsis thaliana Putative O-acetyltransferase NP_568662.1 Cas1_AcylT 39% 0
Arabidopsis thaliana AT5g46340/MPL12_14 AAL11600.1 Cas1_AcylT 38% 0
Arabidopsis thaliana O-acetyltransferase-like protein NP_180988.3 Cas1_AcylT 37% 0
Populus trichocarpa Predicted protein XP_002317300.1 Cas1_AcylT 37% 0
Vitis vinifera CAS1 domain-containing protein 1-like XP_002272126.2 Cas1_AcylT 38% 0
Arabidopsis lyrata subsp. Lyrata O-acetyltransferase family protein XP_002879497.1 Cas1_AcylT 37% 0
Arabidopsis lyrata subsp. Lyrata Hypothetical protein XP_002863407.1 Cas1_AcylT 39% 0
Ricinus communis O-acetyltransferase, putative XP_002519732.1 Cas1_AcylT 38% 0
Glycine max CAS1 domain-containing protein 1-like XP_003532649.1 Cas1_AcylT 38% 0

a The best hit from the NCBI Conserved Domain Database.

Franzén et al.

Franzén et al. BMC Genomics 2012 13:531   doi:10.1186/1471-2164-13-531

Open Data