Additional file 7.
Figure S5. Disruption of sequence co-linearity. Description: Disruption of chromosomal co-linearity between T. c. marinkellei and T. c. cruzi CL Brener non-Esmeraldo-like (A) as well as between T. c. cruzi Sylvio X10 and T. c. cruzi CL Brener non-Esmeraldo-like (B). Black chromosomes prefixed with ‘Chr’ represent sequences from Tc CL Brener whereas white chromosomes prefixed ‘contig’ represent sequences from Tcm and Tcc X10 assemblies. Alignments were generated using the promer software (Kurtz et al., 2004). Chromosomal stretches marked with green color represent gaps in the assembly. Only gaps larger than 5 kb are shown. The most outer numbers are sequence identifiers.
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Franzén et al. BMC Genomics 2012 13:531 doi:10.1186/1471-2164-13-531