Table 4

Co-localizations of SNPs andQTLs
SNP ID Sequence description e-value LG Trait QTL Reference
m157 CELLULOSE SYNTHASE 1.5e-68 3 wood Pot et al. [64]
m264 PEROXIDASE 2.9e-147 8 wood
m941 ENDO- BETA-XYLANASE A-LIKE 0 4 wood
m1542 WATER-STRESS INDUCIBLE PROTEIN 1 9.5e-26 2 δC13 Brendel et al. [62]
m1543 WATER-STRESS INDUCIBLE PROTEIN 3 7.3e-34 2 δC13
m426 WATER DEFICIT INDUCIBLE LP3-LIKE PROTEIN 3.2e-62 3 δC13
m295 AQUAPORIN 9.4e-3 5 δC13
m965 THYLAKOID LUMENAL 19 KDA PROTEIN 7.1e-119 5 ring growth
m712 DEHYDRIN 9 PROTEIN 1.2e-71 8 δC13
m716 DEHYDRIN 2 1.9e-43 8 δC13
m859 THYLAKOID LUMENAL PROTEIN 9.8e-145 12 δC13

Co-localization of mapped SNPs with QTLs detected in previously published maps of P.pinaster. δC13 stands for isotopic composition of C13. Wood stands for wood chemical composition and fibre properties.

de Miguel et al.

de Miguel et al. BMC Genomics 2012 13:527   doi:10.1186/1471-2164-13-527

Open Data