Additional file 1.

Pipeline employed in FCPD 1.2 version. The pipeline still consists of four steps employed in building the previous version of FCPD, but step 3 is now based on optimized parameters. Additionally, a new parameter, coverage, was added to the clustering procedure to further improve clustering results. (PDF 235 kb)

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Moktali et al. BMC Genomics 2012 13:525   doi:10.1186/1471-2164-13-525